Publications

List of publications by Rafał Madaj:

Madaj R, Martinez-Goikoetxea M, Kamiński K, Ludwiczak J, Dunin-Horkawicz S
Applicability of AlphaFold2 in the modeling of dimeric, trimeric, and tetrameric coiled-coil domains.
Protein Sci., 2025, Jan;34(1)
[PubMed]

Wiński A, Ludwiczak J, Orłowska M, Madaj R, Kamiński K, Dunin-Horkawicz S
AlphaFold2 captures the conformational landscape of the HAMP signaling domain.
Protein Sci., 2024, Jan;33(1)
[PubMed]

Kamiński K, Ludwiczak J, Jasiński M, Bukala A, Madaj R, Szczepaniak K, Dunin-Horkawicz S
Rossmann-toolbox: a deep learning-based protocol for the prediction and design of cofactor specificity in Rossmann fold proteins.
Brief Bioinform., 2022, Jan 17;23(1)
[PubMed]

Tomecki R, Drazkowska K, Madaj R, Mamot A, Dunin-Horkawicz S, Sikorski PJ
Expanding the Available RNA Labeling Toolbox With CutA Nucleotidyltransferase for Efficient Transcript Labeling with Purine and Pyrimidine Nucleotide Analogs.
Chembiochem., 2024, Aug 1;25(15)
[PubMed]