Publications

List of publications by Krzysztof Szczepaniak:

Ludwiczak J, Wiński A, Marinho A, Szczepaniak K, Alva V, Dunin-Horkawicz S
PiPred - a deep-learning method for prediction of π-helices in protein sequences.
Sci Rep., 2019, May 3;9(1):6888
[PubMed]

Ludwiczak J, Wiński A, Szczepaniak K, Alva V, Dunin-Horkawicz S
DeepCoil - a fast and accurate prediction of coiled-coil domains in protein sequences.
Bioinformatics., 2019, Jan 2
[PubMed]

Szczepaniak K, Ludwiczak J, Wiński A, Dunin-Horkawicz S
Variability of the core geometry in parallel coiled-coil bundles.
J Struct Biol., 2018, Oct;204(1):117-124
[PubMed]

Szczepaniak K, Lach G, Bujnicki JM, Dunin-Horkawicz S
Designability landscape reveals sequence features that define axial helix rotation in four-helical homo-oligomeric antiparallel coiled-coil structures.
J Struct Biol., 2014, Nov;188(2):123-33
[PubMed]

Madan B, Kasprzak JM, Tuszynska I, Magnus M, Szczepaniak K, Dawson WK, Bujnicki JM
Modeling of Protein-RNA Complex Structures Using Computational Docking Methods.
Methods Mol Biol., 2016, 1414:353-72
[PubMed]

Głów D, Kurkowska M, Czarnecka J, Szczepaniak K, Pianka D, Kappert V, Bujnicki JM, Skowronek KJ
Identification of protein structural elements responsible for the diversity of sequence preferences among Mini-III RNases.
Sci Rep., 2016, Dec 7;6:38612
[PubMed]